- Home
- The ESRF Safety Group
- Preparing for your Experiment
- Biological Experiments
- List of classified proteins
List of classified proteins
In general, a gene which codes for a toxin or a biologically active protein in the physiological mechanisms of the infection or the immunity may be, under certain conditions, a factor of danger whose risk must be examined on a case by case study. The Commission de Génie Génétique (CGG) has established a non-exhaustive list of examples of sequences from categories A and B. The classification into A and B may be modified according to the evolution of knowledge. Concerning toxins; a list is presently being elaboration by the CGG. In the meantime, the CGG will examine case by case the dossiers related to toxins.
Non exhaustive guide of category A and B sequences
I. Viral Sequences
Virus |
Sequence |
Category |
VIH/SIV |
tat |
B |
nef |
B |
|
Vpx |
B |
|
Vpr |
B |
|
gag |
A |
|
pol |
A |
|
env |
A |
|
gag , pol , env exprimés simultanément |
B |
|
Papillomavirus |
E5 |
B |
human and bovine |
E5 - HPV |
A |
E5 - BPV |
B |
|
E6 |
B |
|
E7 |
B |
|
Rabbit Papillomavirus |
E1 |
B |
E2 |
B |
|
E6 |
B |
|
SV 40 |
T |
B |
Polyome |
LT |
A |
MT |
A |
|
ST |
A |
|
The viral sequences capable of modifying the tropism of a virus under certain experimental conditions (surface proteins such as glycoprotein for example) are considered as being in category B
II. Cellular Sequences
Sequences |
Category |
Growth factors |
B(1) |
cell cycle factors |
B |
growth factor receptors |
B(1) |
hormone receptors |
B |
interferon a, b, g |
B |
interleukin 10 |
A |
interleukin (2) 2, 3, 4, 5, 6, 7, 8, 9, 11, 12, |
B |
interleukin (2) 13, 15, 16 |
B |
viral interleukin 6 |
B |
interleukin 1, a |
B |
MIF (lymphokine) |
B |
LIF (leukemia inhibitor factor) |
B |
RANTES (chemokine) |
B |
substance P |
B |
TNF a, b (cytokines) |
B |
GM-CSF |
A |
EPO (erythropoïetin) : - in a transition expression system - in a prolonged expression system |
A B |
HMG-CR |
B |
MIP 1 a (chemokine) |
B |
MIP 1 b (chemokine) |
B |
MIP a 2 (chemokine) |
B |
SDF 1 a (chemokine) |
A |
SDF 1 b (chemokine) |
A |
IP-10 (chemokine) |
B |
MGF (hématopïétic growth factor) |
B |
DC-CK1 (chemokine) |
B |
MDC (chemokine) |
B |
(1) Adjustment possible after examination of the dossier's arguments
(2) All interleukines except IL 10 are in B
III. Toxins
Toxins are considered as being at least type B sequences. A list of toxins is presently being elaborated by the CGG. In the meantime, the experiments are classified on a case-by-case study according to the potential danger conferred by these sequences.
New list of type A or B inserts |
||
Updated October 2001 |
||
A |
B |
|
ABC1 |
AkT |
|
b-gal |
angiostatin |
|
BDNF |
Bac |
|
GDNF |
Bad |
|
GPF |
Bcl |
|
LCAT |
CK-beta-12 |
|
luc |
CK-beta-9 |
|
NT3 |
CNTF |
|
parkin |
endostatin |
|
presenilin |
FE65 |
|
Protein Kinase |
FGF |
|
SCA7 |
Gax |
|
scFV |
MCP1 |
|
SREBP |
p53 |
|
TK |
PPAR d |
|
b-amyloid precursor |
||
protein G |
||
PRP |
||
RANTES |
||
TGFb (BMP; CDMP) |
||
VEG1 |
||
VEGF |
||
vIL10 |
Translation from the French Genetic Engineering Commission Guide